BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026G07SP1|AL428609
(757 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1154 1484 0.0
>3x_Contig1154
Length = 6277
Score = 1484 bits (744), Expect = 0.0
Identities = 750/756 (99%)
Strand = Plus / Minus
Query: 1 atccatgctcaatcagaaacagtttgaggaactgaggctttttatgtccattgtcaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3830 atccatgctcaatcagaaacagtttgaggaactgaggctttttatgtccattgtcaaaaa 3771
Query: 61 cgatgatcttatccaaaaactccattaacaataaggtgcctgcatcattatcattctggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3770 cgatgatcttatccaaaaactccattaacaataaggtgcctgcatcattatcattctggt 3711
Query: 121 agactgtattacagtagtctgaactctgctggtaatcatggagctctccccacaatattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3710 agactgtattacagtagtctgaactctgctggtaatcatggagctctccccacaatattg 3651
Query: 181 ttaacgccgtctgatgatctcctaacatattgattgggtatactgtgatgtattttaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3650 ttaacgccgtctgatgatctcctaacatattgattgggtatactgtgatgtattttaaag 3591
Query: 241 ctcttaattctaaagaattgatgttgtcatagccattcatagcattccgaagtattttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3590 ctcttaattctaaagaattgatgttgtcatagccattcatagcattccgaagtattttca 3531
Query: 301 acacacgttttgcgtcataattttytgacgatttcaaaacagcatgtagctttcttacag 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3530 acacacgttttgcgtcataattttttgacgatttcaaaacagcatgtagctttcttacag 3471
Query: 361 tgchagagttgttgatgtgctctaggtaacgtttcaagagtgtacagaaaatcaccgttt 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3470 tgctagagttgttgatgtgctctaggtaacgtttcaagagtgtacagaaaatcaccgttt 3411
Query: 421 ctgaggattgtvattcaccgacgacaaattctagatatgavagtgacagatccgatcgtt 480
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3410 ctgaggattgtaattcaccgacgacaaattctagatatgaaagtgacagatccgatcgtt 3351
Query: 481 tgctgtctatgtattcatatattctctggtgatcaagctctttgctaaatggcaaaggac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3350 tgctgtctatgtattcatatattctctggtgatcaagctctttgctaaatggcaaaggac 3291
Query: 541 gtagaaataataacatgataatgtcaaatgattcatcagggaatttytctaacaaatagt 600
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3290 gtagaaataataacatgataatgtcaaatgattcatcagggaatttttctaacaaatagt 3231
Query: 601 ccgagtattggaatacaagatccaaatccgtgaattcaagattcttgaggtattcgatca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3230 ccgagtattggaatacaagatccaaatccgtgaattcaagattcttgaggtattcgatca 3171
Query: 661 ccwatgtttttattccaggtttcaaatcaccagtgcgatccaaaatttccgttagcaggt 720
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3170 ccaatgtttttattccaggtttcaaatcaccagtgcgatccaaaatttccgttagcaggt 3111
Query: 721 ccaacgcctttctgtgttcattgttaaaataataaa 756
||||||||||||||||||||||||||||||||||||
Sbjct: 3110 ccaacgcctttctgtgttcattgttaaaataataaa 3075
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5301
Number of Sequences: 1807
Number of extensions: 5301
Number of successful extensions: 113
Number of sequences better than 1.0e-20: 1
length of query: 757
length of database: 10,358,551
effective HSP length: 16
effective length of query: 741
effective length of database: 10,329,639
effective search space: 7654262499
effective search space used: 7654262499
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)